Cytogenetic method

Содержание

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Cytogenetics = The study of chromosome number, structure, function, and behavior

Cytogenetics = The study of chromosome number, structure, function, and behavior

in relation to gene inheritance, organization and expression
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Chromosome Chromo = colored in response to dye Some = body

Chromosome
Chromo = colored in response to dye
Some = body

Chromosome of Eukaryotes

have been the traditional subject for cytogenetic analysis because they are large
enough to be examined with light microscope
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Why Analyse Chromosomes and Genes? Genetic errors arise from deletions or

Why Analyse Chromosomes and Genes? Genetic errors arise from deletions or insertions

of genetic material, abnormal numbers of whole chromosomes or genes, and even from misplacement of a single base in the DNA sequence.
Genetic abnormalities can range from relatively harmless to severe: from vitamin deficiencies and food allergies to cancer, birth defects and infant mortality.
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Cytogenetic methods to detect chromosomal abnormalities underlying human birth defects usually involve analysis of mitotic chromosome

Cytogenetic methods to detect chromosomal
abnormalities underlying human birth defects usually
involve analysis

of mitotic chromosome
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What tissues are appropriate for chromosome study? • A tissue that

What tissues are appropriate for chromosome study?
• A tissue that can

be stimulated to undergo cell division in-vitro
• It is only during mitosis of the cell cycle that distinct chromosomes can be visualized with a light microscope
After culturing, in-vitro, a proportion of
cells are arrested in mitosis, and are then “harvested” for chromosome analysis After harvesting, the cell preparations are dropped onto glass slides and stained. For most chromosome analyses, a G-banding technique is utilized for staining.
Metaphase spread
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The chromosomes are so named as they may be stained by

The chromosomes are so named as they may be stained by

certain dyes
Chromosomes are composed of chromatin, which is composed of protein and DNA
When cells are not dividing, the genetic material is decondensed
Chromosomes become visible as distinct structures when the cell divides
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Chromosome Sister Chromatides

Chromosome

Sister Chromatides

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Chromosomes of different species differ in number and information content Humans

Chromosomes of different species differ in number and information content
Humans

and several other species of organisms have 46 chromosomes
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Karyotyping Karyotype A pictorial display of metaphase chromosomes from a mitotic cell Homologous chromosomes- pairs

Karyotyping

Karyotype
A pictorial display of metaphase chromosomes from a mitotic cell
Homologous

chromosomes- pairs
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Karyotype Karyotyping is the analysis of chromosomes Cytogenetics is the study

Karyotype

Karyotyping is the analysis of chromosomes
Cytogenetics is the study of

chromosomes and inheritance
Cytogenetics is based on studies of humans as well as Drosophila and other organisms
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Preparing a karyotype Harvested cells are first cltured The cells are

Preparing a karyotype

Harvested cells are first cltured
The cells are then

treated with colchicine which arrests the cells in metaphase, and then treated and stained to observe the chromosomes
Chromosomes can be photographed or visualized using a computer, and then analyzed
Chromosomes are identified by size, position of the centromere, and banding and staining regions
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The analysis involves comparing chromosomes for their length, the placement of

The analysis involves comparing chromosomes for their length, the placement of

centromeres (areas where the two chromatids are joined), and the location and sizes of G-bands.
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Metaphase chromosomes

Metaphase chromosomes

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Karyotyped chromosomes

Karyotyped chromosomes

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Banding patterns on human mitotic chomosomes due to regions of condensed

Banding patterns on human mitotic chomosomes
due to regions of condensed chomatin

(darker - G
bands) and less condensed chromatin (lighter - R bands)

human chromosome 4 at varying resolutions due to exact mitotic
stage, (or degrees of spreading - squashing - stretching)

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Human chromosome number is determined by their length in “mitotic figures"

Human chromosome number is determined by their
length in “mitotic figures"

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International System for Cytogenetic Nomenclature, (ISCN,1995) Short arm of the chromosome

International System for Cytogenetic Nomenclature, (ISCN,1995)

Short arm of the chromosome = p
Long

arm of the chromosome = q
Bands are numbered independently on the short and long arms
Centromeres = p10,q10
Band numbers increase as move from the centromere to the telomere
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Hundreds of genes are encompassed within a single G-band. Therefore, most

Hundreds of genes are encompassed
within a single G-band.
Therefore, most constitutional chromosome
abnormalities

are associated with multiple
congenital anomalies.
Therefore, deletion of a single gene cannot be
detected by G-banding.
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Conclusion The evolution of cytogenetic techniques and the mapping of the

Conclusion

The evolution of cytogenetic techniques and the mapping of the human

genome have provided scientists with a great deal of insight into the causes of numerous genetic disorders. Though rooted in early chromosome staining and gene mapping techniques, modern FISH, SKY, and CGH methods have far outshone their predecessors by providing an unprecedented view of human chromosomes.